rs30417278 SNP Detail

Summary

• ID
  rs30417278
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83018204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTC AGGATGCGGA TCTTTAGCAC
  S
  AAGACTAAAG AAATGGTAGA GGAAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45428347	mCV25188539	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss135411401	ENSMUSSNP6408091	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C	G
ss320821087	CHEV_3_82914819	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30417278					SNP	C	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83018204 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	280 bp distal
Rr578837	regulatory region 578837	516 bp distal
Rr578838	regulatory region 578838	1966 bp proximal