rs30417853 SNP Detail

Summary

• ID
  rs30417853
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10185418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTG GGCTATGGTC CCCTAGGCCC
  R
  GCCTGTTCCC TTAGATGGAT TCTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss39688921	mCV23259311	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146041429	ENSMUSSNP6932712	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G		A
ss325720154	CHEV_19_10282544	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30417853					SNP	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10185418 () rs orientation: forward

Symbol	Name	Function Class
Myrf	myelin regulatory factor	218 bp downstream
Rr356596	regulatory region 356596	1418 bp distal
Rr361277	regulatory region 361277	within coordinates
Rr363809	regulatory region 363809	783 bp proximal
Tmem258	transmembrane protein 258	230 bp downstream
Tssr155040	transcription start site region 155040	1575 bp downstream