rs30418178 SNP Detail

Summary

• ID
  rs30418178
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86054221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTA CAGAAGGCCT GGCCCAGCCC
  M
  TGCAGCTTCT GAGTTTCATA GCTCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45926675	mCV23939218	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss133354645	ENSMUSSNP6469389	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321845682	CHEV_6_86027233	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30418178					SNP	C	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86054221 () rs orientation: forward

Symbol	Name	Function Class
Add2	adducin 2	Intron
Rr633328	regulatory region 633328	402 bp distal
Rr633329	regulatory region 633329	328 bp proximal
Rr633330	regulatory region 633330	856 bp proximal
Tssr57448	transcription start site region 57448	798 bp upstream
Tssr57449	transcription start site region 57449	831 bp upstream