rs30419418 SNP Detail

Summary

• ID
  rs30419418
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10184070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC TTCTTTTCCA ACTTCAAATT
  W
  GCTCAGTTTA CTTTTCAAAC TGAGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss39686862	mCV23259597	ABI	CRAMUS_MOUSE	f	SNP	T	T	A				T		A
ss50603766	NES13643268	PERLEGEN	MM_PANEL2	f	SNP	T		A	T	A	T		T		A	A		A	T	T	A
ss146041398	ENSMUSSNP5575453	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A						A
ss325720146	CHEV_19_10281196	CHEVERUD	SCREENING_POP	f	SNP												A					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30419418					SNP	T	T	A	T	A	T	T	T	A	A	A	A	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50603766	NES13643268	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10184070 () rs orientation: forward

Symbol	Name	Function Class
Myrf	myelin regulatory factor	1566 bp downstream
Rr356596	regulatory region 356596	70 bp distal
Rr361277	regulatory region 361277	775 bp proximal
Rr362959	regulatory region 362959	1269 bp distal
Tmem258	transmembrane protein 258	within coordinates
Tssr155040	transcription start site region 155040	227 bp downstream