rs30419717 SNP Detail

Summary

• ID
  rs30419717
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64735898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGGAAAA GCAATGTCAG
  GCCCGGCTCT GTTACTGATG GTTTGTGCTG CTGTCCACGA GTCAGATTAG CCTTCCTAGA
  AATTAATTTC CTCATTGATC AAATGCTGAG ATCAGACCAA AGGATTTTAA AGGTCTTTAA
  CTTTAAAACT GAATTTAAAG GAATTTCTCC CTTTTAAAGG AAATAGGATA TAAAATATCT
  Y
  TAGATCAATA ATAATGTGAC ATAAAATTTT TTAAAAATTA AATGTTTTAT GTCAAATTAT
  TTTTTATAAA TTAGAAAAAA TGCTCTATGA CAACTTTTTA ACAATTCCTT CCTTTGTCTC
  TCTGTCTATC TGCCTCTGTG CCTCCTTCTG CTCCCTCCCT CCTTTCTTTC TTTTCTTGAG
  ACAGAGTCTC ACTATGTAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46404528	mCV25282384	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss136565473	ENSMUSSNP216403	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss322985953	CHEV_9_64676423	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30419717					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64735898 () rs orientation: forward

Symbol	Name	Function Class
Dennd4a	DENN domain containing 4A	within coordinates
Tssr2912	transcription start site region 2912	1504 bp downstream
Tssr2913	transcription start site region 2913	1708 bp upstream