rs30430670 SNP Detail

Summary

• ID
  rs30430670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41441269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCAACTTT CAATAGGAAC
  AATAATTCCC ATATCTCAGC AACTCTCCAC AATGTTCATT GCCTAGTTTT AAATACTCCT
  ATTGCCATCC CTTTGTCAGA GAGACCAAAG GACAATCAGA AGCTCAAGAC TTGTGTAAAA
  CACCTGTTTT TTATAGAGGA AATAAGTGTT TTAAAATAAG TGATGCCAGG CAGTGGTGGC
  R
  CACGCCTTTA ATCCCAGCAC TTGGGAGGCA GAGGCAGGCA GATTTCTGAG TTCGAGGCCA
  GCCTGGTCTA CAAAGTGAGT TCCAGGACAG CCAGGGCTAC ACAAAGAAAT CCTGTCTTGA
  AAACAAACAA ACAAACAAAC AAACAAACAA ACAAACAAAC CCCAAGAAAA CAAAAAACAA
  AAAATAAGTG ATGCAGAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46407591	mCV24305838	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss136357106	ENSMUSSNP331429	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A	G
ss322926764	CHEV_9_41338056	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30430670					SNP	A	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41441269 () rs orientation: forward

Symbol	Name	Function Class
Gm48742	predicted gene, 48742	within coordinates
Mir100	microRNA 100	1452 bp upstream
Mir100hg	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene	within coordinates
Tssr84510	transcription start site region 84510	1519 bp upstream