rs30434445 SNP Detail

Summary

• ID
  rs30434445
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:52403722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGGTGA AAGCGTGCAG
  CATCGCCCCT CGTCCCGCGA CCGGCCCCAT CAGGCTCATC ATGAGGTGCC CTAAAGTGAG
  ATACCACACC AAGGTCTGGG CTGGCAGGGG GCTTCAGCCT GGAGGAGCTC AGGGTGGCTG
  GCATCCACAA GAAAATAGCT CGCACCATCG GCATCTCTGT GGACCCGAGG AGGCGAGAAA
  M
  AAGTCCATGG AGTCACTGCA GGCCAACGTG CAGCACCTGA AGGAGGACCA CCCCAAGCTC
  ATACTTTTCC CCAGGAAGCC TTCTGCTCCA AAGAAAGGAG ACAGCTTTGC TGAAGAACTT
  AAGCTGGCCA CGCAGCTGAC AGGACCCGTG ATGCCCATCT GGAATGTGTA CAAAAAGGAA
  AAGGCCAGAG TCATCACAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46948766	NES10935616	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30434445					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46948766	NES10935616	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:52403722 () rs orientation: forward

Symbol	Name	Function Class
Gm14585	predicted gene 14585	within coordinates
Pabir3	PABIR family member 3	within coordinates