rs30436994 SNP Detail

Summary

• ID
  rs30436994
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77920535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTACCAGT TTAAAGCCCT
  GATCTCTGCC TGAGAGGTAT CTGAGCTGGT CACCCCACCC GATCCCCTGC TATCACACCC
  TCAGGGATGG CTCACTAGCA ATGCCCCCAG ACCAGATCCA GCTCTATCCT GCTGCCCAGA
  TGAGGTACAG GGCCTGATCC CCCAAATGCT GCAGCAGGTG AGGGGCAAGA GCAGCTCTCC
  Y
  ACTCTCATGA CCCCAGCACC AGGTCTCCTG ACTGCCATAG GCAGTGGGAG TGAACAGGGA
  AGAGGGTATC TCTCCCTCAC CCATGCCACT ACAAGGAAAC TGGTGGTAGG ACCAGCTCTC
  ACACTTTCGT ATCATCCTCA GCTGCAACTC CTACAATGTG CAGGCTACTC TCCTGAGTGC
  TGCAGCTGGC TAGCATGGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46407658	mCV22525224	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss136663614	ENSMUSSNP2999700	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30436994					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77920535 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	719 bp downstream
Gm39375	predicted gene, 39375	1765 bp upstream
Gm69108	predicted gene, 69108	within coordinates
Rr683457	regulatory region 683457	783 bp proximal