rs30437804 SNP Detail

Summary

• ID
  rs30437804
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:53884514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGAGATTA CAAGTAATTT
  TTAAATCTCA GATAAAAAAG GCCAATAGAT TTAATCAAGA CTTTCTTTGT CCTTTTCATT
  TGAACAAGTA AATTCACTTT AATTTTTAAA AAGTGCAATA CTGCCTAGTT AGTGGCATAT
  GGGAAATTTA CACTCATTTT GGTGGGTGTA ACTTTTCTCT ACTATGCATT TTACAAAGTA
  W
  AAGTCTCTCC TATTTTGATG CTCTCTCCTA AAAATGCTGT TCTGTGTTCC AAGTTGGTTC
  TTTCAGACAC AGTGGCTGGT AAGCTATCTA TAGGATTTCT GGTTCCATGT GTTGGTTGAC
  GCTAATTGAA GAGTGCTTAC AACATTTTAT AATTCAAAGT AGAAGAGTCT GGATACTCTA
  AGTTTGAGAA GAACATTCTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46949077	NES10808357	PERLEGEN	MM_PANEL2	f	SNP	A	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30437804					SNP	A	T	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46949077	NES10808357	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53884514 () rs orientation: forward

Symbol	Name	Function Class
Gm64314	predicted gene, 64314	within coordinates
Rr397671	regulatory region 397671	1690 bp downstream
Rr576760	regulatory region 576760	1512 bp distal
Rr576761	regulatory region 576761	255 bp proximal