rs30439026 SNP Detail

Summary

• ID
  rs30439026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:123270535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TGTGGCAAAG AAGACATTAA AATGCCTGCT TATCTCTCTC GCAGTCCTTT
  Y
  GGCTCGGCAC TGGCAGACTT CTGGATGCCC GTGGATCTGT ACATCGGAGG           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss46408650	mCV23337023	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss137077318	ENSMUSSNP29578	ENSEMBL	ENSEMBL_Sanger	f	SNP				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs30439026					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:123270535 () rs orientation: forward

Symbol	Name	Function Class
Lars2	leucyl-tRNA synthetase, mitochondrial	within coordinates
Rr193658	regulatory region 193658	335 bp distal
Rr203065	regulatory region 203065	502 bp distal
Rr208064	regulatory region 208064	735 bp distal