rs30447269 SNP Detail

Summary

• ID
  rs30447269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137669309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAGACGCT CCGACCCCAA
  CTCCAATGTA TAGCACTGTT CCAATTACCC AGGTAAGAAC TAGTCAAGAT GGAGTTGTGA
  AGAGATTTAG TGCATTGTTA AGTCTCCAAA TTGGTTCACC TTAAAAACAC GAAGAGTCTC
  TTGTGGGCCT GACCTCTTCA TGTGAGCTCC GTGGAACGGA ACTCTCTGAC ACAGGAGAGG
  R
  TAGAGAGGTG CTCTGGCTGG CAGGAAGGCA GCAGACAGTC GTGCCATGTG TATTACGCAT
  GCAGGCCACA CAGCACGGAT CACAGTGGCA TCTGTCAGTT GACACTGCTC CCTCCCTGAT
  TGACAGCTAG GGGAACAGGG ACCCTGGTGC TACCACAGCA GGGAAATGAA AGACAAGCAA
  ACTAGGTAAG GAAAGGAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45429490	mCV27576166	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss135945662	ENSMUSSNP5987433	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320977309	CHEV_3_137626512	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs30447269					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137669309 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dapp1	dual adaptor for phosphotyrosine and 3-phosphoinositides 1			Intron
				Noncoding-Transcript-Variant
Rr586037	regulatory region 586037			1219 bp distal
Rr586038	regulatory region 586038			within coordinates