rs30452601 SNP Detail

Summary

• ID
  rs30452601
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141155643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAAACAT CCATCAAAGA
  CATAATCTTT CCAGTGAATG CTGACCAGTC AAAAGTGGCT ATGCTGGTAA TATCTTCTGA
  ATGATGACTT TGGTTGGTTA TCCCCCTTGT ACTAATGAGA TAAAAATTGC TATTTTGAGG
  ACTCATATAG GTCACACAAT ATCAGTAAAT TTAAGTTGGT TCTGGGAGAT TTTGACTACA
  Y
  TGAACCTTTG TAGAATTAAG TAAGAACGCC CGTTCTAATC AGTGGTAGCT ACAGGAAAGT
  TGTGCTGGGT TGCATCACCT CCATTATACA TTCCTGTAAT ATACGCATCC CCATCCCTTG
  CATTCCTGGG AACTTATGCC ATGTTCCCTT GGCTGGCTCT CCCTTTAAAA GTTGAAGATT
  TAGAGATATT TTTCTGTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45429949	mCV24946095	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss320992242	CHEV_3_141112846	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30452601					SNP	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141155643 () rs orientation: forward

Symbol	Name	Function Class
Gm66152	predicted gene, 66152	within coordinates
Tssr32030	transcription start site region 32030	684 bp downstream