rs30453421 SNP Detail

Summary

• ID
  rs30453421
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50908330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAGCTCG ACTGGAGACT GGACTGTCTG TGTATAGCCC
  AATGCCCCAC AAGGCAAGGT CACACTCACT AAGCTCTACC TGCCCATGGT CAAATAGAAG
  W
  CGAAGGTGTG AGTCCACATC AATGTCCTAT GCCGAAGGCG AGCGAGTGAA GCCCAAATGT
  CAACTCCACG TGTATTTTTA TGGCTGACTT TTATAGTTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45431415	mCV25250935	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss135170172	ENSMUSSNP1263604	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320761289	CHEV_3_50804831	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30453421					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50908330 () rs orientation: forward

Symbol	Name	Function Class
Rr72151	regulatory region 72151	within coordinates
Rr72152	regulatory region 72152	1271 bp proximal