rs30454170 SNP Detail

Summary

• ID
  rs30454170
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70835604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCT TCATCTGCAG CCCCTGGTGC
  Y
  TCAGCTTTCT GTACTCAGAG TGTAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss39187627	mCV25261737	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss139686284	ENSMUSSNP4167397	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30454170					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70835604 () rs orientation: forward

Symbol	Name	Function Class
B930095I24Rik	RIKEN cDNA B930095I24Rik gene	1251 bp upstream
Cpgi6702	CpG island 6702	924 bp proximal
Fhip2b	FHF complex subunit HOOK interacting protein 2B	Intron
Rr369865	regulatory region 369865	1282 bp upstream
Rr494968	regulatory region 494968	692 bp proximal
Rr494969	regulatory region 494969	1661 bp proximal
Tssr4471	transcription start site region 4471	1394 bp downstream
Tssr129613	transcription start site region 129613	1637 bp downstream
Tssr129614	transcription start site region 129614	1649 bp downstream
Tssr129615	transcription start site region 129615	1668 bp downstream