rs30455821 SNP Detail

Summary

• ID
  rs30455821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122035808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTTGCACA GTTATCTGGG AGTTCTATGA TCTTGTAGAA
  CAAGGGGGAA GATATCCTCT GCTTTAATTT CTCTGACCAG ATCAGTGTAG GTTTTCAAGT
  R
  TGGTTTTTGA ACTCCCAGAT GGCCAGTTGT ACCAATTTGT TATTTTTAAT TAATATGTAA
  TGTTATGGTA AAGTTTAACC AGAAATTAAA GTGTATCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45430762	mCV25132680	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss135737712	ENSMUSSNP2927511	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320909863	CHEV_3_121945077	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30455821					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122035808 () rs orientation: forward

Symbol	Name	Function Class
Gm46822	predicted gene, 46822	within coordinates
Gm65290	predicted gene, 65290	945 bp upstream
Rr375675	regulatory region 375675	601 bp upstream
Rr584261	regulatory region 584261	583 bp proximal
Rr584262	regulatory region 584262	956 bp proximal
Rr584263	regulatory region 584263	1039 bp proximal
Rr584264	regulatory region 584264	1694 bp proximal
Tssr31477	transcription start site region 31477	944 bp upstream