rs30456399 SNP Detail

Summary

• ID
  rs30456399
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79150436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAAGTTAA GACATAAACT ATTCAACTCT ACAGATTCAC
  TGGTCTCCAT AGTTAGTGAA GGAGGAGAAC CAGTAAAGAG CTGATGCTGA TGCAGGTCTA
  K
  ATAATTAGCA CTGTCTCTCA CAGACAATAA CAACAGACAA AACAGTGGGC AGATATTTGC
  ATTCAGCGGT TACCTTTCCA GCATCCTTTT CTTCCAAAT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39187648	mCV24528024	ABI	CRAMUS_MOUSE	f	SNP		G				G		T
ss52508689	NES15574185	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G		G		G	G	T	G	G	G	G
ss139802641	ENSMUSSNP6916684	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30456399					SNP	G	G	G	G	G	G	G	T	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52508689	NES15574185	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79150436 () rs orientation: forward

Symbol	Name	Function Class
Rr369884	regulatory region 369884	1297 bp upstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates