rs30457083 SNP Detail

Summary

• ID
  rs30457083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37722362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTCATTTA AGAATGGACA TTTTCATAAC GTTACACATA
  TAAGGGGTTA CAAAGAAAAA AACGATTTTT GTCCTCTGCC TTTTCCAGGT TTCACCATTT
  R
  TGCTTTATTG AATAAATATC TCCCCGCCCC CAAATCAACA TGAAAAACTT ACACCTATTT
  TTTAGAATAT AGTGACATAG AAATGTGTGT CTATCATTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45431649	mCV25186398	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss134810571	ENSMUSSNP2670806	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss320711618	CHEV_3_37567135	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30457083					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37722362 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13101	CpG island 13101	792 bp proximal
Rr575535	regulatory region 575535	876 bp distal
Rr575536	regulatory region 575536	153 bp distal
Tssr28922	transcription start site region 28922	602 bp upstream