rs30458155 SNP Detail

Summary

• ID
  rs30458155
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:35114774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTT TATTGTTTAT TTATCCTTTA
  K
  AGAAGGTTGG AAGCAGCAAG CATCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss44930454	mCV24868745	ABI	CRAMUS_MOUSE	f	SNP		G	T					G		G
ss60718095	NES16346928	PERLEGEN	MM_PANEL2	f	SNP	G		T	G	G	G	T		G	G	T	G		G	T	T	G		G
ss148903691	ENSMUSSNP2438264	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T							G
ss319684165	CHEV_1_35132538	CHEVERUD	SCREENING_POP	f	SNP													T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30458155					SNP	G	G	T	G	G	G	T	G	G	G	T	G	T	G	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60718095	NES16346928	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:35114774 () rs orientation: forward

Symbol	Name	Function Class
D1Mit243	DNA segment, Chr 1, Massachusetts Institute of Technology 243	848 bp distal
Gm53547	predicted gene, 53547	within coordinates