rs30458164 SNP Detail

Summary

• ID
  rs30458164
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:50297287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCAT TTATAGACAT CTCTTGTCCT
  W
  CTAATGGGCA TTAATTAAAA ACTAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39187114	mCV23499620	ABI	CRAMUS_MOUSE	f	SNP		A	T	A
ss139454945	ENSMUSSNP174531	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss324615140	CHEV_14_50679505	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30458164					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:50297287 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6404	CpG island 6404	1850 bp proximal
Gm37194	predicted gene, 37194	1530 bp upstream
Rr491685	regulatory region 491685	1227 bp proximal
Tssr125363	transcription start site region 125363	1527 bp upstream