rs30458971 SNP Detail

Summary

• ID
  rs30458971
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:34573342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACA AGGAAGAGAC CTCAGCTCCC
  M
  ATATAGGATG TTGAGGAGAG AGACC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46409314	mCV25036069	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss136286956	ENSMUSSNP3681463	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss322896966	CHEV_9_34469631	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30458971					SNP	A	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:34573342 () rs orientation: forward

Symbol	Name	Function Class
Kirrel3	kirre like nephrin family adhesion molecule 3	within coordinates
Rr194528	regulatory region 194528	1142 bp distal
Rr203599	regulatory region 203599	1106 bp distal
Rr208757	regulatory region 208757	1348 bp proximal