rs30459220 SNP Detail

Summary

• ID
  rs30459220
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30165627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACC TGAAGAACAG CCCTCAGGGG
  Y
  TGAGGGCGGG AGAGGAAAAG CCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45931092	mCV23778913	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss133095078	ENSMUSSNP7085691	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321776189	CHEV_6_30115628	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30459220					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30165627 () rs orientation: forward

Symbol	Name	Function Class
Mir182	microRNA 182	290 bp downstream
Mirc35	microRNA cluster 35, including Mir182 through Mir183	290 bp proximal
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rr627709	regulatory region 627709	1473 bp proximal