rs30463245 SNP Detail

Summary

• ID
  rs30463245
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:125395035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGCCTCCTGC CTCCTGCCTC CTGCCTCCTG CCTCCTGCCT CCTGCCTCCT GCCTCCTGCC
  TCCTGCCTCC TGCCTCCTGC CTCCTGCCTC TGCCTCCTGA GCGCTTAGGT GTGTTACCTA
  CCCCATGCCT GGCCCTTTCT AAATGTTTCT GCTGTAGCTG TGTGTTTGCT TTCTCTGTGT
  CACCCGTTCC CAGCAACAGT GACTTCTATG ATTTCAGAGT GTGATGAACC ACACACTGTG
  AATATAGAAA GCACTGGAAG AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG AAGAAGAAGA
  M
  GAAGAGACGA CGACTTACAG TTAGTTATAT GTGTGTCCCT GGGTGTGGCT GCCGATGGAG
  GCCAGAAGAA GCATCGGATC CCTTGGAGCA GGAAACCACG GGTAGTCGTG AGGGTGCTGC
  TTGGTGTTGG TGCAGGGCTT GCCGAGTATA CCACGGGCAC CAAGGGTCCT GGCCGTGCTA
  GGAGCTGAGC TGGCTGAGTA AGAACATTGA GTGAGCCGGG CGTTGGTGGC ACATGCCTTT
  AATCCCAGCA CTTGGGAGGC AGAGGCAGGC GGATTTCTGA GTTCGAGGCC AGCCTGGTCT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45929738	mCV24919575	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30463245					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:125395035 () rs orientation: forward

Symbol	Name	Function Class
D6Jpk2	DNA segment, Chr 6, Japan, Kominami 2	within coordinates
Gm66368	predicted gene, 66368	within coordinates
Gm66372	predicted gene, 66372	1557 bp downstream
Rr638702	regulatory region 638702	163 bp distal
Rr638703	regulatory region 638703	572 bp proximal
Rr638704	regulatory region 638704	837 bp proximal
Rr638705	regulatory region 638705	1287 bp proximal