rs30463350 SNP Detail

Summary

• ID
  rs30463350
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36052139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTTTAAT ATCTGAAGCT
  GGCATTTGGC CAAAGAGACA ATTAAAAAGC TAAGGTGCTT TAAAAACATC TACCTTGGTT
  TTAAAAACAA AACAAAAAAA TTCTTGTTGG ACTGTAATAG TAAAAACTGC CTGGCACACA
  CAATTAGCAT TGTCATGGAA GATAATAGAC CATATTTTGA CATTTTCTGT TCTATTTTAT
  K
  AAATCAAACA ACAGTTTGAA AATATAATTG AATGCACCCC TTGGGTAAGG CAGTATTGAC
  ATTAAGCCAG AGAAATCAAA GGAAGGACGT TGAACAGAGA TAATAGAAAT AAGAAATGTT
  GGCAGGGCTA GAGAGATGGC TCAGCGGTTA AGAGCACTGA CTGCTCTTCC AGAGGTCCTG
  AGTTCAATTC AAACCACATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45433544	mCV24305371	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss134776665	ENSMUSSNP3893699	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30463350					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36052139 () rs orientation: forward

Symbol	Name	Function Class
Mccc1	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	within coordinates
Mccc1os	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand	1923 bp upstream
Rr575296	regulatory region 575296	1753 bp proximal
Rr575297	regulatory region 575297	1955 bp proximal