rs30466673 SNP Detail

Summary

• ID
  rs30466673
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185246576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGAGATGC TAAGTTGGTA AAGTGATTTT CACACCAACA
  TGAGGACCTG GCTTGGTCTC CCCAGCACCT ATGTAAAGCC ATGAGCACAG TGATGTGTCC
  Y
  TATGATGCCT GTGCTGGTGA GGAGGTGGAG GCTCATGACC CCAGGTCACT GGCAGCTGCA
  GGGTTAATGA CATACCTGTC TTAAAAATAA TAAAGAAGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss44931910	mCV24006348	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146434943	ENSMUSSNP2294425	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss320176784	CHEV_1_187338258	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30466673					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185246576 () rs orientation: forward

Symbol	Name	Function Class
Rr425406	regulatory region 425406	560 bp proximal