rs30467527 SNP Detail

Summary

• ID
  rs30467527
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132290250 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                         ATGATGCAC ATATAGGGTG TTTCCATTTA AAAATCCTCT
  GCAAACCTAT GGTTTGCCTA AAGAATGTTC TTTCCCCAGT GATTCCAATT AGAACGCTAT
  S
  ATTGCACATA AAATACACAA CTACACAGAG CCTATACTTG TCACAGTTTT AATTTATTTT
  TGTACTCCCC TCTGTATCCA TAGCTGTCTA ATTTTTAAAA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45931083	mCV24778883	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	C
ss321965809	CHEV_6_132263305	CHEVERUD	SCREENING_POP	r	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30467527					SNP	G	G	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132290250 () rs orientation: reverse

Symbol	Name	Function Class
Prb1b	proline-rich protein BstNI subfamily 1B	within coordinates
Tssr2031	transcription start site region 2031	1464 bp downstream