rs30470154 SNP Detail

Summary

• ID
  rs30470154
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96248042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT CTAGATTATA GGTAAGGCTA
  R
  AAGCTAAGGA ATGGAAATAA TTTTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46410307	mCV24857925	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
ss136831165	ENSMUSSNP7071025	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
ss323108165	CHEV_9_96266408	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30470154					SNP	A	A	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96248042 () rs orientation: forward

Symbol	Name	Function Class
Atp1b3	ATPase, Na+/K+ transporting, beta 3 polypeptide	1674 bp upstream
Cpgi22162	CpG island 22162	1100 bp distal
Gm68867	predicted gene, 68867	within coordinates
Tssr90956	transcription start site region 90956	1667 bp upstream
Tssr90957	transcription start site region 90957	1564 bp upstream
Tssr90958	transcription start site region 90958	1538 bp upstream