rs30470974 SNP Detail

Summary

• ID
  rs30470974
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:123270309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTTTTA GAGACAGAGT
  TTTTCAGTGT AGCCCTGGCT GTCCTGGGTC TTGCTCTGTA AGCCAGTTTG GTCTTGAACT
  CAGAGATCTG CCTGCTCTGC CTCTCAAGTG CTGGGATTAA AGGTGTGGGC CACTACTGCC
  TGGCTCAAAA ATTACCTTTT TTTTACATTT GTTTAGTGTG TGTGTGTGTG CACACACGCG
  M
  GTGTGTGCAC ATGTGCCGTG AGCCATGCAG AGGTCAGAGG ATGGCTTGTG GTCCAGTCAA
  TGCTTCTCCT TTTCTCACTT ATTATGTACA TTTTTCTTTT GTTTAAAAAA AAAGTCATAT
  TTTCTGGCAC TAGTATTTTC AAGGGATGAG CACACATAGC TTTAATTTAT ATAGTTGTGG
  CAAAGAAGAC ATTAAAATGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46410116	mCV23337035	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss137077312	ENSMUSSNP2163654	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30470974					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:123270309 () rs orientation: forward

Symbol	Name	Function Class
Lars2	leucyl-tRNA synthetase, mitochondrial	within coordinates
Rr193658	regulatory region 193658	109 bp distal
Rr203065	regulatory region 203065	276 bp distal
Rr208064	regulatory region 208064	509 bp distal