rs30473486 SNP Detail

Summary

• ID
  rs30473486
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135108348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCAGGGTTC CCAGAGCAAC CTCTCTGGAT GATCTCAGTC
  GCTGTTGTTT ATTTTGTTCT GTGTGTTTGT TGACAGAAAA GGAGGGGAAT TTTATGGGGA
  M
  ATGTCTAGAG CAACTTCTGG TCTCATAGTT CACAAAAAGC CACCACTGAA TGTGGACGAA
  ATATCGACAT CATTTGCAAT ATCATAGGCT TTATCTTTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss44933036	mCV25393529	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss145526768	ENSMUSSNP1278369	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30473486					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135108348 () rs orientation: forward

Symbol	Name	Function Class
Rr419094	regulatory region 419094	679 bp distal
Rr419095	regulatory region 419095	52 bp proximal
Tssr13831	transcription start site region 13831	276 bp downstream