rs30473710 SNP Detail

Summary

• ID
  rs30473710
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:167197775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTCCTATTA ACATGGATTA AGGGAATCAC ACTCCGGTGG TCAGGCTTGG TGGTAAATTC
  TACAGGATGA GCCATCTCTC TGGCTTAAGA CTGGTCATCG TGATCAGGAT TGGATAGCAT
  CTTAAGAATG TAAAGGGGAA GTTATCCAAA TTCTGGGTTA CACCAGCAGA TGGCGCCCAA
  GCTTTCTACC ACACCTTGAG CCCTGCTTCT GGTCTTGGGC GCCTCCTACT GTGCATGCGT
  GATCATGGAG CCTCAGTAAT TGTGTACGAG GGTTTCCAAT GTCCCTAATG GCTCATGTAC
  K
  TACTTGAAAC TTGGTGCCCC GTTGGTGATG TTTTAGGAGG CTGTGGGATC TTTGGGACAT
  ACTTCTGTTA GGTGGAGAGA TACTCTGGTT TCCTTTCCTG ATTCACATCA TTATACCCTT
  AAAAGCTGAC TCCCCACTGG TCTGCTCCAC TTTTGGTTAT ATGAGCTGGT CACATGGAGA
  AAGCAGCAGC TACAGTCTGA GGGAGGCCAG GGCAGGAAGG TGTCACAGCA GAAACAGCAG
  CAGAGGACAG AACTGAGACA AAAGGACGAT GTCTGTTAGG ATCCAGAGAC AAGAAACAGC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44932172	mCV22658250	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30473710					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167197775 () rs orientation: forward

Symbol	Name	Function Class
Aldh9a1	aldehyde dehydrogenase 9, subfamily A1	1675 bp downstream
Mgst3	microsomal glutathione S-transferase 3	1760 bp downstream
Rr396523	regulatory region 396523	3 bp downstream
Rr422697	regulatory region 422697	194 bp distal
Rr422698	regulatory region 422698	121 bp distal
Rr422699	regulatory region 422699	64 bp distal
Rr422700	regulatory region 422700	10 bp proximal
Rr422701	regulatory region 422701	209 bp proximal