rs30473982 SNP Detail

Summary

• ID
  rs30473982
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61563437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCCCCACCC TGCCTCCATC TTAGGCTTAA AAGCTATCTT
  ATAGTAAACA CAAACTAGGT TTATTCCAGT TTATGATTAA ATCTCTGTTT CTCAAGGATT
  R
  GGCTATGCCC AACCTTAATT ACAAATGGTT CTGTACTGCC TGTTCCAGAA AATGATAACC
  ATATCTTTGT TTCAGAAAAG TGCAGCCATC TTACAATCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39189093	mCV23119393	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss139612997	ENSMUSSNP6763620	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30473982					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61563437 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	178 bp upstream
Gm62465	predicted gene, 62465	1242 bp upstream
Rr289706	regulatory region 289706	964 bp proximal
Rr297339	regulatory region 297339	1563 bp proximal
Tssr129059	transcription start site region 129059	94 bp upstream