AGTAA CCGGAGTAGA AACCCGGGGT R CACACACCCC TAACTACATA ATGAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|---|
ss46411951 | mCV25258237 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | G | G |
ss136877687 | ENSMUSSNP5150358 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | G | ||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
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rs30480284 | SNP | A | A | G | G | G |
Location: Chr9:103290839 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D9Mgc25 | DNA segment, Chr 9, MRC UK Mouse Genome Centre 25 | 649 bp proximal | ||||||
D9Mit242 | DNA segment, Chr 9, Massachusetts Institute of Technology 242 | 124 bp distal | ||||||
Gm47328 | predicted gene, 47328 | within coordinates | ||||||
Gm69201 | predicted gene, 69201 | within coordinates | ||||||
Rr198513 | regulatory region 198513 | 1239 bp distal | ||||||
Rr198514 | regulatory region 198514 | 839 bp distal | ||||||
Rr207103 | regulatory region 207103 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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