rs30483191 SNP Detail

Summary

• ID
  rs30483191
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105248522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTTCATTA TGAGTGAATG
  CTTAATAGAT ACATGTCTTT ATGACCTCTT TTCACAAGCT CTACCAGAAA CATGCTTGGT
  CTCTTTAAGT ATAAGGTGGT CCCAAAATTA CTCCACGGCC TTGCAATGAT ATTACATTTG
  AAGTCACCAA GAGAATACAA ATATTAAGCC CTGAAGTCAA AGTCTTAATT GGCCTCAGGG
  Y
  AAAACTTCTA AAAACCACTC TGTTATGCCT CTTCTATTCT TATACATGGG AAACAAAGCA
  AGGTGAGCAT GGATCACTGT TTAAACATCT GACTTCCCAA CCCCAATGAG AGGGCTGTAA
  GTCAGGGACA GTCCTATTGA CAAATAACAC AGGGTTTCCC CTCCACAGAC GCCAGCATCT
  AGCGCAGTCA TCGACTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47952331	NES12024639	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30483191					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47952331	NES12024639	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105248522 () rs orientation: forward

Symbol	Name	Function Class
Gm66627	predicted gene, 66627	634 bp upstream
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates