rs30483500 SNP Detail

Summary

• ID
  rs30483500
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122296151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGC CGAGGTGATT GTAGTCGTGA
  R
  CCTCACGTTA GGCTTCTCCT CAGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss39189977	mCV25174057	ABI	CRAMUS_MOUSE	f	SNP	G	G			A		A
ss52524805	NES15586799	PERLEGEN	MM_PANEL2	f	SNP			A	A		G	A		G	G
ss147010247	ENSMUSSNP5632009	ENSEMBL	ENSEMBL_Sanger	f	SNP		G					A
ss324857817	CHEV_14_122457961	CHEVERUD	SCREENING_POP	f	SNP								G			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs30483500					SNP	G	G	A	A	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52524805	NES15586799	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122296151 () rs orientation: forward

Symbol	Name	Function Class
Gm63354	predicted gene, 63354	675 bp upstream
Gm63496	predicted gene, 63496	1462 bp downstream
Rr404309	regulatory region 404309	1975 bp upstream
Rr498317	regulatory region 498317	686 bp distal
Rr498318	regulatory region 498318	365 bp distal
Rr498319	regulatory region 498319	1903 bp proximal
Tssr127312	transcription start site region 127312	373 bp downstream
Tssr130315	transcription start site region 130315	656 bp upstream