rs30484327 SNP Detail

Summary

• ID
  rs30484327
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61212043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGAATTTA TTTTATTTCT
  AGTTCACTTA GTTTCTTTTA TTTATGAGAT TTAAAAAAAA AGATGTATTT ATTTTATGTA
  TACGAACACA CTGTAGACTT TTGCTCTCTT CACCAGAAAA GGGCATCAGA TCCCATTACA
  GATGGTTGTG AGCCACCGTG TTGTTGCTGG GAATTGAATT CAAGACCTCT GGAAGAGCAG
  Y
  CAGTGCTCTG AACCGCTGAG CCATCTCTCC AGCTCTATTT ATGAGATCTT TATGTAACAT
  TAGGTTCTTT ATTTTTTAAA AAATTATACT GGGTCATCAA GACAGTTGTG GGTTAATCTA
  CTAAGTCTTC ACATGAGCAC ACGCCCCATT GCCAGTAAAT AAATGTCTTG TTTAAAAAGA
  ATACAACATC CAGGATGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46412751	mCV25201904	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss136538564	ENSMUSSNP2686562	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss322978674	CHEV_9_61152568	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30484327					SNP	T	T	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61212043 () rs orientation: forward

Symbol	Name	Function Class
Rr201095	regulatory region 201095	1158 bp proximal
Rr204422	regulatory region 204422	1640 bp distal
Rr204423	regulatory region 204423	720 bp proximal
Rr204424	regulatory region 204424	1464 bp proximal