rs30495778 SNP Detail

Summary

• ID
  rs30495778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7667020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTTGAATT CCTGGCCCTC TTGCTTCTGC TGAGATACCC
  TAGCAGGTAT CCTAGAGACT CTTGACTAAA TCAAAAACTT TATTTTACCT TTTGTAAACC
  R
  ACTGTGGCTA TTTAACAACT GCTACCTTCA CTCTGATTAA CTACATAAAA CCTGCTTAAG
  TATTATACAT ACTTAGGTCG GTAGGGCCCT GTGCCCAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39190798	mCV25170364	ABI	CRAMUS_MOUSE	f	SNP		G	A			A		G
ss51189966	NES14316976	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A		G	G	A	G	A	G	G	A
ss139100815	ENSMUSSNP2977373	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30495778					SNP	G	G	A	A	A	A	G	G	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51189966	NES14316976	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7667020 () rs orientation: forward

Symbol	Name	Function Class
Nek10	NIMA (never in mitosis gene a)- related kinase 10	837 bp upstream
Tssr124320	transcription start site region 124320	1390 bp upstream