rs30497701 SNP Detail

Summary

• ID
  rs30497701
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126263004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACACAGTA AACAAATAAA
  GAATGAGTTT CCTTAGAAGA ACTGCAGGGG TAGGCAGAAG AACGCATAGA TAATTTTGTA
  AGATATGAGC AGGGACCTGG TCATCTTTCT TCTCTGTCAT CCTGAACAGT CAGGTCCTTC
  TCCTCCTGTT ACATTTTGTT CTTGTCATAT TTTAGAAACA AGTAAAAGAA GGGGAAATGA
  K
  AAACACGCCT GCAGCCTCTC ACACGCGGAA GACCCTCCTA CACTACAAGC TACATCTGGT
  GCACGTAGTG TTTATGCTAC CTGCTACTGC ATGGTAAGTC ACTCCAGTTC TCCACAAGGA
  AATGACACGT GTCTGCCATC TGGATACGTA TCAAGAGGGA AAGGCTAAGC TCTGGTCTGT
  CCAGGCAATA TCATTTGAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss46954411	NES10684262	PERLEGEN	MM_PANEL2	f	SNP			G	G	T	G	G		G	G		G
ss135833523	ENSMUSSNP2474628	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T				G
ss320945471	CHEV_3_126172273	CHEVERUD	SCREENING_POP	f	SNP								G			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs30497701					SNP	T	T	G	G	T	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46954411	NES10684262	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126263004 () rs orientation: forward

Symbol	Name	Function Class
Gm17225	predicted gene 17225	within coordinates
Gm46823	predicted gene, 46823	within coordinates