rs30502238 SNP Detail

Summary

• ID
  rs30502238
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117769749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGACCAGTG TCCACTAGAT GACACTGTTG TATAAGCACA GTAATAGGTG GCACTTTTTT
  TGACAATAAC ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT
  ATACAGTGTC TCTTTTCAGA TGAAACTGGC TTAGCATTTT TAATTGGATA TGGTTGATAA
  CTATAACTTC ACGTGATTTA GGGTGAAGTT ACCCACAAAG GTTAACATGA AGGGGAAGAA
  AAGAAACATC CATTGCACAG CATTCGTCTC TTTACAGTAA AAAAAAAAAA AAAAAAAAAA
  M
  AAAACAAAAA AAAAAAATTC TCTCCCAAAC CTACATATTT CACAGTTAAA ATAAACCTCA
  TTGTGAGCCT TCCACGGTTC TGTGTTAGAA CAGTGACCAT GAGTCTATCA AGTGTCTGTT
  TTTCAAGTAG CATTTTGTGA GTAATCTGTT TTTCTTTTTC CTTCCCCAAA GCCTCCCTCT
  AATCTTTTTT TTCTTCCTTT CCTGTAACCT TCCTCTCTTC TCTTGTCTTT TCAATGCTTC
  CTTTTCTTTT TGCTTGAAGA CTGAGAATCA TTCAGGTGCA GGCCAAAGTA GGAGGCAGAA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45435046	mCV23489825	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30502238					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117769749 () rs orientation: forward

Symbol	Name	Function Class
Gm32344	predicted gene, 32344	within coordinates
Rr583879	regulatory region 583879	92 bp distal
Rr583880	regulatory region 583880	272 bp distal