rs30503013 SNP Detail

Summary

• ID
  rs30503013
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:63612652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAA TGTAAAAGGT CTGAAGCTTT
  R
  TTCTAAGCAG CCGCTAAGAG AAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss44935218	mCV22677733	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss149156834	ENSMUSSNP7032409	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
ss319743832	CHEV_1_63620067	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30503013					SNP	G	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:63612652 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adam23	a disintegrin and metallopeptidase domain 23			Intron
				Noncoding-Transcript-Variant
Gm22281	predicted gene, 22281			1995 bp downstream
Rr412178	regulatory region 412178			946 bp distal
Rr412179	regulatory region 412179			within coordinates