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rs30504591 SNP Detail
Summary
  • ID
    rs30504591
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr3:37570726 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TAACC GTAGTATATG AATATAATAG
    W
    TTAGTGAGTC AGCGTCTGGC TCTCC                                      
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss45435171 mCV24339111 ABI CRAMUS_MOUSE f SNP A T A A
ss134807240 ENSMUSSNP1904704 ENSEMBL ENSEMBL_Sanger f SNP A T A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs30504591 SNP A T A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:37570726 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Afg2a AFG2 AAA ATPase homolog A Intron
Noncoding-Transcript-Variant
Rr575494 regulatory region 575494 684 bp distal
Rr575495 regulatory region 575495 933 bp distal
Rr575496 regulatory region 575496 828 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory