rs30505818 SNP Detail

Summary

• ID
  rs30505818
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30172075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG TCTTTAGGGA TCTTTTGCTA
  M
  CATTCAGCAA CTGTCACCAT CAACC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45934443	mCV24692142	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss133095153	ENSMUSSNP4809305	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321776214	CHEV_6_30122076	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30505818					SNP	C	C	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30172075 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17248	CpG island 17248	840 bp proximal
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rncr4	retina expressed non-coding RNA 4	817 bp upstream
Rr146072	regulatory region 146072	1674 bp distal
Rr146073	regulatory region 146073	74 bp distal
Rr146074	regulatory region 146074	125 bp proximal
Tssr55327	transcription start site region 55327	784 bp upstream
Tssr60107	transcription start site region 60107	2000 bp downstream