rs30508909 SNP Detail

Summary

• ID
  rs30508909
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75104687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTGGGGAATT ACCTACATAG ACTGGTTACT GAGCACATCT GCAGTAGATT GTCTTTACTG
  GTAATTGACT TAGTAGGGTC TGGCCCACCA TAGGCAGTAT CATTCCTTTA ACAGGTGGTC
  TTGAAGTATA TTAGAAAGTT AGCGGCCGGG CATGCTGGCG CACGCCTTTA ATCCCAGCAC
  TTGGGAGGCA GAGGCAGGCA GATTTCTGAG TTCAAGGCCA GCCTGGTCTA CAAAGTAAGT
  TGCAGGACAG CCCGGTCTAC ACAAAGAAAC CCTGTCTCGA AAAACCAAAA AAAAAAAGAA
  R
  AAAAAAGGAA GGAAGGAAGG AAGGAAGGAA GTTAGCTGCA TGTGAACCAG CCGGCAAGCA
  GTGTCCTCCA TGGTTCCTGC TGTACTTCTT TGGCTGTGAA GTGAGCTTGT TTGGAGGCCG
  AGCTGTGTGG CTTCGCAAGC AGGCCTGCCT TCAAGATTCT GTCCTGAGTT CCTGTCATGG
  CTTGCCTCAA TGATAGACCG TGACCTGGAA TTGTTGACTG AATAAAACAT TCCCTCCCCT
  AAAATGCTTT TAATCTGAGT GTTTTACCAC AGCAACAGCA CCAGGGCATG CACTTAGCAC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss44935805	mCV23611952	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30508909					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75104687 () rs orientation: forward

Symbol	Name	Function Class
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	within coordinates
Tssr7483	transcription start site region 7483	507 bp upstream
Tssr12338	transcription start site region 12338	534 bp downstream
Tssr12339	transcription start site region 12339	558 bp downstream
Tssr12340	transcription start site region 12340	600 bp downstream