rs30510072 SNP Detail

Summary

• ID
  rs30510072
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86626487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCC GTCCACAGTG ACCTTGTGTG
  R
  CTGGGACTAT TCTCTCTGCC AGGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45935815	mCV23943356	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss133358181	ENSMUSSNP4808221	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321846879	CHEV_6_86599499	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30510072					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86626487 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mxd1	MAX dimerization protein 1			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Tssr61827	transcription start site region 61827			463 bp upstream
Tssr61828	transcription start site region 61828			76 bp upstream
Tssr61829	transcription start site region 61829			424 bp downstream
Tssr61830	transcription start site region 61830			655 bp downstream