rs30510632 SNP Detail

Summary

• ID
  rs30510632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:47718547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGG AACCCTGTCT TAAAAAACCA
  Y
  CAAACAAAAC AACCTCCTGT CCCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss44935830	mCV25365535	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss146469442	ENSMUSSNP1604152	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30510632					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:47718547 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11035	CpG island 11035	778 bp proximal
D19Dcr55	DNA Segment, Chr 19, Derry C. Roopenian 55	2000 bp distal
Gm58934	predicted gene, 58934	within coordinates
Rr370527	regulatory region 370527	979 bp upstream
Rr406020	regulatory region 406020	1830 bp upstream
Rr549123	regulatory region 549123	328 bp proximal
Rr549124	regulatory region 549124	1089 bp proximal
Rr549125	regulatory region 549125	1230 bp proximal
Rr549126	regulatory region 549126	1358 bp proximal
Rr549127	regulatory region 549127	1441 bp proximal
Rr549128	regulatory region 549128	1585 bp proximal
Sfr1	SWI5 dependent recombination repair 1	1612 bp upstream
Tssr156884	transcription start site region 156884	1635 bp upstream
Tssr156885	transcription start site region 156885	1666 bp upstream