rs30511665 SNP Detail

Summary

• ID
  rs30511665
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37561104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACACACCC ATGCAAAAAA CATCCCATCT GAAACAGCAA
  CTAACGAGCC TGGAGGAGTG TAGGAAGGGA CATCTAGGGA GAGACAACAC AGGACTCCTA
  S
  AGTCACAAGA ACCTTTCTAG TGCTGCGAAA GTCTTGCATT AGAAGAAAAC ACCTTTTCCC
  AGGGCAAGAA GATCAAGCCC TATTGTAGGC ATTCAGACCA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47455935	NES11491402	PERLEGEN	MM_PANEL2	f	SNP	G	C	C	C	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30511665					SNP	G	C	C	C	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47455935	NES11491402	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37561104 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	753 bp upstream
Gm18267	predicted gene, 18267	within coordinates
Gm64931	predicted gene, 64931	1018 bp upstream