rs30513449 SNP Detail

Summary

• ID
  rs30513449
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37561428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGGTTGGAA GTAACTTCCT TGCAGGCAGA AGCCAAGCCG
  GAGCCCCTCA AGACAAGGAG GATGATGCAG GGCACAGAGA TGTCCTCCAA ACCTCATGAC
  W
  GAGGACTCTG TCTACAAAAG TCAGTCTTCC TCAGCAGAGA GCAAGTACAA TCATCTCCTC
  AGGACCTTCA TCAGGGAGCT CCGGAAAGAA ACAACATAAC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47455959	NES11491411	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	A	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30513449					SNP	T	T	T	A	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47455959	NES11491411	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37561428 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	429 bp upstream
Gm18267	predicted gene, 18267	within coordinates
Gm64931	predicted gene, 64931	694 bp upstream