rs30514918 SNP Detail

Summary

• ID
  rs30514918
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:76474535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAAAATAA AACTCAGGAG
  TTTGAAAGCT TGCAGGTCTA AAAAGAGAGT ATAGGAGATT CTGGGACATA TCAAGATTGG
  CATCAAATAA AATAAATTAA GATGCAACAA AATAAAATAT TAATAAATAT GCAAGGTTCT
  ATGACAGCAT TACTACTGCA ATGCACTGTG GTTACCTATT CTATAAGAAA TCCTCAACCG
  S
  ACGCTTGAAC ATAGAAACAA AAGCTTCAAA GCAGTGGGCT TGTCAGAACA ATGAAAGTTA
  TTAATAAGGT ACTATGTATT GCTGTAAATA TTAGGAGATA ATTTTGAAAG TGAATATAAT
  ATATAGAACA AAGAAATGCA TAGGTAAAGG AAAAAAAGAA TAAACTCATT ACTGACAATA
  AATTTTAGGA AAACAAATTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss45438572	mCV24200554	ABI	CRAMUS_MOUSE	f	SNP	G			C
ss47017222	NES10768809	PERLEGEN	MM_PANEL2	f	SNP		C	C		C	C	C	C	G	G
ss135341127	ENSMUSSNP1154999	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30514918					SNP	G	C	C	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47017222	NES10768809	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:76474535 () rs orientation: forward

Symbol	Name	Function Class
Fstl5	follistatin-like 5	Intron
Rr578399	regulatory region 578399	293 bp proximal