rs30515163 SNP Detail

Summary

• ID
  rs30515163
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:97805714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTA ACCAGAGCAT AATAACACAT
  W
  TGGTGACCAG GGAGTGTATC CTAGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45938004	mCV23115517	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30515163					SNP	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97805714 () rs orientation: forward

Symbol	Name	Function Class
Mitf	melanogenesis associated transcription factor	within coordinates
Tssr1945	transcription start site region 1945	1437 bp downstream
Tssr57866	transcription start site region 57866	1784 bp downstream
Tssr57867	transcription start site region 57867	1511 bp downstream
Tssr57868	transcription start site region 57868	1489 bp downstream
Tssr57869	transcription start site region 57869	1451 bp downstream
Tssr57870	transcription start site region 57870	1292 bp downstream
Tssr57871	transcription start site region 57871	1274 bp downstream
Tssr57872	transcription start site region 57872	504 bp downstream
Tssr57873	transcription start site region 57873	458 bp downstream
Tssr57874	transcription start site region 57874	441 bp downstream
Tssr57875	transcription start site region 57875	421 bp downstream
Tssr57876	transcription start site region 57876	391 bp downstream
Tssr57877	transcription start site region 57877	507 bp upstream
Tssr57878	transcription start site region 57878	551 bp upstream
Tssr57879	transcription start site region 57879	567 bp upstream
Tssr57880	transcription start site region 57880	620 bp upstream
Tssr57881	transcription start site region 57881	820 bp upstream
Tssr57882	transcription start site region 57882	918 bp upstream