rs30518160 SNP Detail

Summary

• ID
  rs30518160
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77183791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTGAACC TGTAAGCAGC
  CCCAATGAAA TGTTGTCCTT AAAAAAAAAG TTACTAAGAC GAAAGTGAAC TAAAATTTTC
  TGTACACGCT CATAGTAAGT GAATGAAGGG AAGAGTACAT TAGAATTAAA CTTTGGATAG
  TTTGGGTTAG AGAGAAGATG TCTAAGAGAA GGGGCTGAAT AAGGAGTTGA ACGTAAGTCT
  R
  GTTTTCAATT ACAAGGTGTG AAGACATAAA TAGTGCAGAC AAAATACAAG GAGTGTTTAT
  AGCCTTGAGA TTGAGTTATA TTGTATAACC AAGTAATAAA AGTAGTTAGA AATCAATCAT
  ATGGGAGGAC AAAGGTTGAA AACCACAGTG TGCCTCCTGG ACACCTTCAG TAGCTCAGCT
  TGTTGGATGC AGAATGGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46415291	mCV22299545	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss136655329	ENSMUSSNP3022968	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss323012062	CHEV_9_77124316	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30518160					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77183791 () rs orientation: forward

Symbol	Name	Function Class
Gm53504	predicted gene, 53504	1881 bp upstream
Mlip	muscular LMNA-interacting protein	within coordinates
Rr683300	regulatory region 683300	195 bp proximal