rs30519347 SNP Detail

Summary

• ID
  rs30519347
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48216806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTA AGGTCAGAGC TGCCACAAAT
  R
  TGGGAGGAGC TAGGTCCAAC CCCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46414621	mCV22888746	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss136451418	ENSMUSSNP5965100	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss322953086	CHEV_9_48113589	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30519347					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48216806 () rs orientation: forward

Symbol	Name	Function Class
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Rr195312	regulatory region 195312	1606 bp distal
Rr195313	regulatory region 195313	206 bp distal
Rr209369	regulatory region 209369	1572 bp distal
Rr383325	regulatory region 383325	within coordinates