rs30523160 SNP Detail

Summary

• ID
  rs30523160
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:42774121 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCA CACAGAGCAC TCGGCAACAC
  R
  CATGGCCTTC ACTTAAATCC CAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46415447	mCV23035070	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss136386084	ENSMUSSNP5603991	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss322936133	CHEV_9_42670908	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30523160					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:42774121 () rs orientation: forward

Symbol	Name	Function Class
Gm55338	predicted gene, 55338	696 bp upstream
Gm67530	predicted gene, 67530	within coordinates
Grik4	glutamate receptor, ionotropic, kainate 4	within coordinates
Rr677286	regulatory region 677286	1296 bp distal
Rr677287	regulatory region 677287	577 bp proximal